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Lab, Cardiovascular Research Center, Yale University</center_name><full_dataset_link>https://www.ebi.ac.uk/ena/browser/view/PRJNA1117836</full_dataset_link><scientific_name>Mus musculus</scientific_name><long_description>Pericytes (PCs) are microvascular mural cells which constituent the embryonic blood brain barrier (BBB) along with endothelial cells (ECs). During brain development, germinal matrix (GM) - a highly vascularized region rich in neuronal-glial precursors, is selectively vulnerable to hemorrhage in premature infants. The transforming growth factor β (TGFβ) pathway plays a crucial role in barrier development by regulating cellular cross talk between PCs and ECs. Indeed, murine embryos lacking TGFβ receptor activin receptor-like kinase 5 (Alk5) in brain PCs (mutants) develop gross germinal matrix hemorrhage-intraventricular hemorrhage (GMH-IVH) and culminate in perinatal lethality. Mutant GM vessels display reduced PC and collagen coverage, abnormal vessel dilation and EC hyperproliferation. However, the mechanistic link between PC-specific deletion of ALK5 and aberrant EC behavior remains elusive. Herein, using bulk RNA sequencing from human brain PCs lacking ALK5 (siALK5) as well as murine vascular cells [PCs and ECs] isolated from embryonic brain at embryonic days E11.5 and E13.5 we establish that angiopoietin 2 (ANGPT2), a secreted angiogenic growth factor, is robustly repressed by the TGFβ pathway in PCs. Conversely, mutants lacking PC-ALK5 secrete higher levels of ANGPT2 resulting in overactivation of tyrosine protein kinase receptor (TIE2) and culminating in EC hyperproliferation, vessel dilation, BBB breakdown and GMH. PC-specific Angpt2 deletion or pharmacological inhibition in mutants improves GM vessel morphology, reduces EC proliferation and attenuates GMH pathogenesis. Taken together, we demonstrate that loss of TGFβ-mediated ANGPT2 repression in PCs is detrimental for BBB integrity and identify ANGPT2 as an important pathological target for GMH-IVH. Overall design: To evaluate ALK5-mediated differential gene expression in percityes during cerebrovascular development at E13.5, perciytes were isolated from murine embryonic brains of Pdgfrb-Cre, Alk5(flox/+) [control] and Pdgfrb-Cre, Alk5(flox/flox) [mutant] mice also bearing ZS green by flow cytometry. Total RNA was isolated and subjected to bulk RNA sequencing.</long_description><repository>ENA</repository></additional><is_claimable>false</is_claimable><name>Determine the role of ALK5 signaling in murine brain pericytes at embryonic day E13.5</name><description>Determine the role of ALK5 signaling in murine brain pericytes at embryonic day E13.5</description><dates><last_updated>2025-09-24</last_updated><first_public>2024-07-01</first_public></dates><accession>PRJNA1117836</accession><cross_references><GEO>GSE268575</GEO><taxon>10090</taxon></cross_references></HashMap>