<HashMap><database>ENA</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/030/SRR32085930/SRR32085930.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/023/SRR32085923/SRR32085923.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/025/SRR32085925/SRR32085925.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/024/SRR32085924/SRR32085924.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/022/SRR32085922/SRR32085922.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/026/SRR32085926/SRR32085926.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/031/SRR32085931/SRR32085931.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/029/SRR32085929/SRR32085929.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/021/SRR32085921/SRR32085921.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/027/SRR32085927/SRR32085927.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/032/SRR32085932/SRR32085932.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR320/028/SRR32085928/SRR32085928.fastq.gz</Fastqsanger.gz></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Genomics</omics_type><center_name>Hudson Institute of Medical Research</center_name><full_dataset_link>https://www.ebi.ac.uk/ena/browser/view/PRJNA1214396</full_dataset_link><scientific_name>Homo sapiens</scientific_name><long_description>Endoplasmic reticulum (ER) stress and activation of the unfolded protein response (UPR) are hallmarks of pathogen infection. The UPR drives pro-inflammatory responses to ER stress but its role in interferon signaling is unknown. Using metabolomics approaches, we observed that pharmacological ER stress reprogrammed macrophage metabolism to a pro-inflammatory “M1-like” phenotype and enhanced the microbicidal activity of these cells to restrict bacterial infection. Phospho-proteomics analysis showed that this anti-microbial response was mediated via the UPR serine/threonine-protein kinase/endoribonuclease IRE1 (ERN1) and activation of signal transducer and transcription activator 1 (STAT1) required for interferon signaling. We also demonstrated that blockade of IRE1 signaling by the bacterial pathogen Legionella pneumophila inhibited STAT1-mediated immune responses to infection. These findings reveal the potential for ER stress to initiate anti-microbial STAT1 signaling in the absence of other pro-inflammatory stimuli and how this response is inhibited by a bacterial pathogen during infection. Overall design: To investigate the role of Legionella effector proteins on host mRNA expression, THP-1 macrophages were infected with the Legionella pneumophila 130b strain (WT) or a mutant strain lacking four genes encoding Lgt1-3, SidI and SidL (delta4). We then performed comparitive gene expression profiling of RNA-seq data from WT versus delta4 infected cells from three independent experiments.</long_description><repository>ENA</repository></additional><is_claimable>false</is_claimable><name>Coupling ER stress to STAT1-mediated immunity against bacterial infection</name><description>Coupling ER stress to STAT1-mediated immunity against bacterial infection</description><dates><last_updated>2025-09-24</last_updated><first_public>2025-04-05</first_public></dates><accession>PRJNA1214396</accession><cross_references><GEO>GSE287755</GEO><taxon>9606</taxon></cross_references></HashMap>