{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/009/SRR1611959/SRR1611959.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/003/SRR1611963/SRR1611963.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/002/SRR1611962/SRR1611962.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/005/SRR1611965/SRR1611965.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/001/SRR1611961/SRR1611961.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/006/SRR1611966/SRR1611966.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/008/SRR1611968/SRR1611968.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/007/SRR1611967/SRR1611967.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/000/SRR1611960/SRR1611960.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR161/004/SRR1611964/SRR1611964.fastq.gz"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["GUDMAP Database Group, IGMM MRC Human Genetics Unit"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJNA263812"],"scientific_name":["Mus musculus"],"long_description":["We will use micro-dissection and FACS techniques to isolate cell types from the developing lower urogenital region and perform a transcriptional analysis using RNA-SEQ. This analysis will determine the transcriptional profile of each cell type, identify compartment specific transcripts, compartment specific transcript isoforms and cell-type specific long-noncoding RNAs. In addition the unbiased nature of RNA-SEQ will potentially identify novel transcripts that have not been annotated in the database. Overall design: Total RNA was obtained from FACS isolated embryonic day 17.5 bladders using Tg(Upk2-cre)6Xrw x Gt(ROSA)26Sortm4(ACTB-tdTomato,-EGFP)Luo transgenic mice. The long term goal is to generate a transcriptional atlas of developing lower urogenital region."],"repository":["ENA"],"additional_accession":[]},"is_claimable":false,"name":"Mus musculus","description":"RNA-SEQ analysis of the developing lower urogenital region","dates":{"last_updated":"2025-09-24","first_public":"2014-12-10"},"accession":"PRJNA263812","cross_references":{"GEO":["GSE62310"],"taxon":["10090"]}}