{"database":"ENA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["Tokyo University"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJNA324374"],"scientific_name":["Homo sapiens"],"long_description":["To assess transcriptional regulation by DNA demethylation in SAEC, we carried out a microarray analysis of SAEC treated with a demethylating agent (5-aza-dC) and a HDAC inhibitor (TSA). We used the Agilent SurePrint G3 Human Gene Expression 8x60K v3 microarray which contains probes for 26,083 Entrez genes and 30,606 lncRNAs. Overall design: SAECs were treated with 3 μg/ml of 5-aza-dC on day1, 3 and 1 μg/ml of TSA on day4. Total RNA was extracted on day5, and microarray analysis was carried out using Agilent SurePrint G3 Human Gene Expression 8x60K v3."],"tag":["xref:PubMed:28698358"],"repository":["ENA"],"description_synonyms":["Therapy, Non Protein Coding, RNA, TDPX1, wide/broad, NKEF-B, Nontranslated RNA, npcRNA, determination, HDAC Inhibitor, NKEFB, Non Peptide Coding, PRP, 1.11.1.15, indole glycerol phosphate hydrolase activity, Thioredoxin peroxidase 1, 4E, Natural killer cell-enhancing factor B, broad, BX1, Histone, Histone Deacetylase Inhibitor, 4-heptadienamide, Noncoding RNA, TSA, Thiol-specific antioxidant protein, Non-Peptide-Coding RNA, PrxII, Non-Coding RNA, indoleglycerolphosphate aldolase activity, chemical analysis, 6R)-7-(4-(dimethylamino)phenyl)-N-hydroxy-4, Inhibitors, 2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase (indole-forming) activity., 2R)-1-C-(indol-3-yl)glycerol 3-phosphate D-glyceraldehyde-3-phosphate-lyase activity, NkefB, Non-Peptide-Coding, Untranslated RNA, PRXII, indole synthase activity, HDAC, tryptophan synthase alpha subunit activity, treatment, Genomes, Non-Coding, Non-Protein-Coding RNA, long, Histone Deacetylase, Torin, INSDC_qualifier:other, whole genome, Nontranslated, Tdpx1, Non-Protein-Coding, Deacetylase Inhibitor, Treatments, Thioredoxin-dependent peroxide reductase 1, AL022839, indole-3-glycerol phosphate lyase activity, 6-dimethyl-7-oxo-2, indole-3-glycerolphosphate D-glyceraldehyde-3-phosphate-lyase activity, wide, Non Coding, Therapeutic, Band-8, (1S, TDX1, disease management, IGL, Therapies, Deacetylase Inhibitors, tryptophan synthase alpha activity, TPX1, Noncoding, Treatment, TPx-B, HEL-S-2a, assay, HDAC Inhibitors, PTX1, PRX2, Inhibitor, (2E, TPx, TR"],"name_synonyms":["Human, Modern., human being, Man (Taxonomy), Homo sapiens, man, Man, human, Modern Man"],"additional_accession":[]},"is_claimable":false,"name":"Homo sapiens","description":"Genome-wide analysis of long noncoding RNA (lncRNA) expression for SAEC after treatment with demethylatiog agent (5-aza-dC) and histone deacetylase inhibitor (TSA)","dates":{"last_updated":"2025-09-24","first_public":"2017-06-30"},"accession":"PRJNA324374","cross_references":{"GEO":["GSE82214"],"taxon":["9606"],"PubMed":["28698358"]}}