{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/000/SRR6876050/SRR6876050_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/001/SRR6876051/SRR6876051_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/008/SRR6876048/SRR6876048_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/001/SRR6876051/SRR6876051_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/000/SRR6876050/SRR6876050_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/009/SRR6876049/SRR6876049_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/009/SRR6876049/SRR6876049_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR687/008/SRR6876048/SRR6876048_1.fastq.gz"]},"type":"primary"},"statusCodeValue":200,"statusCode":"OK"}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["Bioinformatics Core Facility, Wellcome Centre for Cell Biology, University of Edinburgh"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJNA442754"],"scientific_name":["Saccharomyces cerevisiae"],"tag":["xref:PubMed:31031198"],"long_description":["ChIP-seq profile of Spo13 binding sites arrested in prophase I by deletion of the meiotic transcription factor NDT80. Previous ChIP-ChIP data had indicated that Spo13 binding correlates with cohesin binding sites. Therefore, in addition to wild type cells, we also investigated cells deficient of the meiosis-specific cohesin subunit Rec8 to identify cohesin-dependent binding sites of Spo13. Overall design: Diploid S. cerevisiae SK1 cells were constructed containing Spo13-3Flag in an ndt80Δ background. Cells were allowed to sporulate in sporulation media for 5 hours after which formaldehyde was added to the cultures and cells were fixed for 30min. Samples were then processed according to the standard lab ChIP-Seq protocol."],"repository":["ENA"],"description_synonyms":["SPNGAF60, meiosis I nuclear division, wide, count in organism, absence, absent from organism., wide/broad, Genomes, ligand, number, whole genome, broad, presence"],"name_synonyms":["SPNGAF60, meiosis I nuclear division, wide, count in organism, absence, absent from organism., wide/broad, Genomes, ligand, number, whole genome, broad, presence"],"additional_accession":[]},"is_claimable":false,"name":"Genome-wide binding of the meiosis I-specific Spo13 in the presence and absence of cohesin","description":"Genome-wide binding of the meiosis I-specific Spo13 in the presence and absence of cohesin","dates":{"last_updated":"2025-09-24","first_public":"2019-04-26"},"accession":"PRJNA442754","cross_references":{"GEO":["GSE112170"],"taxon":["4932"],"PubMed":["31031198"]}}