ENAapplication/xmlftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420328/SRR8420328_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420326/SRR8420326_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420307/SRR8420307_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/004/SRR8420324/SRR8420324_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/002/SRR8420322/SRR8420322_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420305/SRR8420305_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420317/SRR8420317_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420307/SRR8420307_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/004/SRR8420324/SRR8420324_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420320/SRR8420320_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/002/SRR8420312/SRR8420312_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420319/SRR8420319_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420303/SRR8420303_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420305/SRR8420305_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420309/SRR8420309_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/002/SRR8420322/SRR8420322_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420310/SRR8420310_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420316/SRR8420316_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420328/SRR8420328_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/001/SRR8420311/SRR8420311_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420326/SRR8420326_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420303/SRR8420303_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420330/SRR8420330_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420320/SRR8420320_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420309/SRR8420309_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420315/SRR8420315_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420318/SRR8420318_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420313/SRR8420313_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420327/SRR8420327_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420329/SRR8420329_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420325/SRR8420325_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420323/SRR8420323_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420318/SRR8420318_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420306/SRR8420306_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420323/SRR8420323_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/001/SRR8420311/SRR8420311_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/003/SRR8420313/SRR8420313_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420330/SRR8420330_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420306/SRR8420306_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420308/SRR8420308_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/001/SRR8420321/SRR8420321_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/004/SRR8420304/SRR8420304_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420319/SRR8420319_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420317/SRR8420317_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/007/SRR8420327/SRR8420327_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420315/SRR8420315_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/000/SRR8420310/SRR8420310_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/005/SRR8420325/SRR8420325_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/008/SRR8420308/SRR8420308_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/004/SRR8420304/SRR8420304_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/004/SRR8420314/SRR8420314_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/006/SRR8420316/SRR8420316_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/001/SRR8420321/SRR8420321_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/002/SRR8420312/SRR8420312_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR842/009/SRR8420329/SRR8420329_1.fastq.gzprimaryOK200M82255GenomicsThe University of Queenslandhttps://www.ebi.ac.uk/ena/browser/view/PRJNA512395Klebsiella oxytocaThe investigation into an outbreak of extended spectrum beta-lactamase (ESBL) producing Klebsiella oxytoca in a special care nursery revealed contaminated washing detergent as the source. The Contaminated detergent resulted in colonisation of 10 patients with ESBL K. oxytoca. The control of the outbreak required intensive infection control investigation where real-time WGS confirmed the source and likely transmission characteristics.pathogen:prioritypathogen:bacteriumpathogenxref:EuropePMC:PMC7180233bacteriaENAfalseKlebsiella oxytoca strain:M82255Genomic investigation reveals contaminated detergent as the source of an ESBL-producing Klebsiella oxytoca outbreak in a neonatal unit2025-09-242019-01-11PRJNA512395571