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Lab, Biochemistry, University of Wisconsin at Madisonhttps://www.ebi.ac.uk/ena/browser/view/PRJNA549707Mus musculusxref:PubMed:28808057xref:PubMed:31439663xref:PubMed:31053643ChIP-seq was performed in triplicate on isolated tissues (kidney, thyroparathyroid (TPTG), peripheral blood monocytes) from hormone treated (vehicle, 1,25(OH)2D3, FGF23, or PTH) mice from wildtype (WT), M1-IKO, M21-IKO, VDR-KO, or Cyp27b1-KO mice as indicated in the sample listings. The pBMC samples were isolated from untreated mice and subsequently treated ex vivo in cell culture with the indicated concentrations of 1,25(OH)2D3 or forskolin. Studies are published under PMID 28808057 and PMID 31053643. Overall design: ChIP-seq was performed in triplicate on isolated tissues (kidney, thyroparathyroid (TPTG), peripheral blood monocytes) from hormone treated (vehicle, 1,25(OH)2D3, FGF23, or PTH) mice from wildtype (WT), M1-IKO, M21-IKO, VDR-KO, or Cyp27b1-KO mice as indicated in the sample listings. The pBMC samples were isolated from untreated mice and subsequently treated ex vivo in cell culture with the indicated concentrations of 1,25(OH)2D3 or forskolin. Studies are published under PMID 28808057 and PMID 31053643.ENA3.4.22.-, ChIP-Chip, VddrI, Chromatin Immuno-precipitation, determination, Nr1i1, Laboratory, Blood, Mus domesticus, CLIP-Seq, mini-ICE, CASP-14, Assay for Transposase-Accessible Chromatin Using Sequencing, House Mouse, House, PBMC, Chromatin Immunoprecipitation Sequencing-Chip, 1, Mus musculus domesticus, 25-Hydroxyergocalciferol, Mice, ChIA-PET, 1-hydroxylase, Chromatin Immunoprecipitation Sequencing Chip, 25-Hydroxyvitamin D2 1-hydroxylase, Chromatin Immuno precipitation Sequencing, 25 Hydroxyvitamin D3 1 alpha Hydroxylase, ChIP, Swiss, Chromatin Immunoprecipitation Paired End Tag, Chromatin Immuno Precipitation Paired End Tag, CYP27B1, Cross-Linking and Immunoprecipitation Followed by Deep Sequencing, Swiss Mice, 25-Hydroxyvitamin D 1-alpha-Hydroxylase, Sequencing, Chromatin Immunoprecipitation Paired-End Tag, CP2B, Monocyte, VDR, Vdr, 25 Hydroxyvitamin D 1 alpha Hydroxylase, Cytochrome P 450 CYP27B1, ATAC-Seq, Chromatin Immunoprecipitation Sequencing-Chips, Cytochrome P-450 CYP27B1, 25-Hydroxyergocalciferol 1-alpha-Hydroxylase, Cyp40, NADPH:oxygen oxidoreductase (1-hydroxylating), reniculate kidney, HITS-CLIP, High Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, 25-Hydroxycholecalciferol-1-Hydroxylase, Pddr, whole blood, Cross Linking and Immunoprecipitation Followed by Deep Sequencing, mouse, ChIP Sequencing, P450c1, VDDR, vdr-A, Nuclear receptor subfamily 1 group I member 1, 25 Hydroxyvitamin D2 1 hydroxylase, ChIP-PET, CYP27B, Cp2b, ChIP-Exo, Calcidiol 1 Monooxygenase, PDDR, Mus, CYP1alpha, chemical analysis, Mini-ICE, Vdd1, VDD1, High-Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, 25-Hydroxyvitamin D(3) 1 alpha-Hydroxylase, Mus musculus., Mus musculus, NR1I1, CYP1, TPTG, Peripheral Blood, Caspase-14 subunit p10, 25-Hydroxycholecalciferol 1-Hydroxylase, mice, PPP1R163, Swiss Mouse, Cyp27b, 1-alpha-Hydroxylase, Chromatin Immunoprecipitation, House Mice, Chromatin Immuno-precipitation Sequencing, VDDRI, Caspase-14 subunit p19, ChIP Exonuclease, MICE, ChIP-Seq, xVDR, Assay for Transposase Accessible Chromatin Using Sequencing, 25-Hydroxyvitamin D, Calcidiol 1-Monooxygenase, Laboratory Mice, domesticus, Reticuloendothelial System, Kidneys, 25 Hydroxycholecalciferol 1 Hydroxylase, Chromatin Immuno-Precipitation Paired-End Tag, PBMCs, 25 Hydroxyergocalciferol 1 alpha Hydroxylase, 25-Hydroxyvitamin D2, Vddr, Calcidiol, Mouse, assay, Cyp1, 25-dihydroxyvitamin D3 receptor, ChIP-Exonuclease, Laboratory Mouse3.4.22.-, ChIP-Chip, VddrI, Chromatin Immuno-precipitation, determination, Nr1i1, Laboratory, Blood, Mus domesticus, CLIP-Seq, mini-ICE, CASP-14, Assay for Transposase-Accessible Chromatin Using Sequencing, House Mouse, House, PBMC, Chromatin Immunoprecipitation Sequencing-Chip, 1, Mus musculus domesticus, 25-Hydroxyergocalciferol, Mice, ChIA-PET, 1-hydroxylase, Chromatin Immunoprecipitation Sequencing Chip, 25-Hydroxyvitamin D2 1-hydroxylase, Chromatin Immuno precipitation Sequencing, 25 Hydroxyvitamin D3 1 alpha Hydroxylase, ChIP, Swiss, Chromatin Immunoprecipitation Paired End Tag, Chromatin Immuno Precipitation Paired End Tag, CYP27B1, Cross-Linking and Immunoprecipitation Followed by Deep Sequencing, Swiss Mice, 25-Hydroxyvitamin D 1-alpha-Hydroxylase, Sequencing, Chromatin Immunoprecipitation Paired-End Tag, CP2B, Monocyte, VDR, Vdr, 25 Hydroxyvitamin D 1 alpha Hydroxylase, Cytochrome P 450 CYP27B1, ATAC-Seq, Chromatin Immunoprecipitation Sequencing-Chips, Cytochrome P-450 CYP27B1, 25-Hydroxyergocalciferol 1-alpha-Hydroxylase, Cyp40, NADPH:oxygen oxidoreductase (1-hydroxylating), reniculate kidney, HITS-CLIP, High Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, 25-Hydroxycholecalciferol-1-Hydroxylase, Pddr, whole blood, Cross Linking and Immunoprecipitation Followed by Deep Sequencing, mouse, ChIP Sequencing, P450c1, VDDR, vdr-A, Nuclear receptor subfamily 1 group I member 1, 25 Hydroxyvitamin D2 1 hydroxylase, ChIP-PET, CYP27B, Cp2b, ChIP-Exo, Calcidiol 1 Monooxygenase, PDDR, Mus, CYP1alpha, chemical analysis, Mini-ICE, Vdd1, VDD1, High-Throughput Sequencing of RNA Isolated by Crosslinking Immunoprecipitation, 25-Hydroxyvitamin D(3) 1 alpha-Hydroxylase, Mus musculus., Mus musculus, NR1I1, CYP1, TPTG, Peripheral Blood, Caspase-14 subunit p10, 25-Hydroxycholecalciferol 1-Hydroxylase, mice, PPP1R163, Swiss Mouse, Cyp27b, 1-alpha-Hydroxylase, Chromatin Immunoprecipitation, House Mice, Chromatin Immuno-precipitation Sequencing, VDDRI, Caspase-14 subunit p19, ChIP Exonuclease, MICE, ChIP-Seq, xVDR, Assay for Transposase Accessible Chromatin Using Sequencing, 25-Hydroxyvitamin D, Calcidiol 1-Monooxygenase, Laboratory Mice, domesticus, Reticuloendothelial System, Kidneys, 25 Hydroxycholecalciferol 1 Hydroxylase, Chromatin Immuno-Precipitation Paired-End Tag, PBMCs, 25 Hydroxyergocalciferol 1 alpha Hydroxylase, 25-Hydroxyvitamin D2, Vddr, Calcidiol, Mouse, assay, Cyp1, 25-dihydroxyvitamin D3 receptor, ChIP-Exonuclease, Laboratory MousefalseExtensive ChIP-seq analysis for VDR, pCREB, H3K4me1, H3K9ac, H3K36me3 from kidney, thyroparathyroid (TPTG), and peripheral blood monocytes (pBMCs) from wildtype (C57BL/6), M1-IKO, M21-IKO, VDR-KO, and Cyp27b1-KO mice.Extensive ChIP-seq analysis for VDR, pCREB, H3K4me1, H3K9ac, H3K36me3 from kidney, thyroparathyroid (TPTG), and peripheral blood monocytes (pBMCs) from wildtype (C57BL/6), M1-IKO, M21-IKO, VDR-KO, and Cyp27b1-KO mice.2025-09-242019-06-21PRJNA549707GSE13302510090288080573143966331053643