ENAapplication/xmlftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/057/SRR18858757/SRR18858757_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/075/SRR18858775/SRR18858775_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/051/SRR18858751/SRR18858751_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/088/SRR18858788/SRR18858788_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/050/SRR18858750/SRR18858750_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/090/SRR18858790/SRR18858790_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/064/SRR18858764/SRR18858764_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/058/SRR18858758/SRR18858758_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/068/SRR18858768/SRR18858768_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/074/SRR18858774/SRR18858774_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/099/SRR18858799/SRR18858799_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/098/SRR18858798/SRR18858798_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/077/SRR18858777/SRR18858777_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/091/SRR18858791/SRR18858791_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/092/SRR18858792/SRR18858792_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/086/SRR18858786/SRR18858786_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/052/SRR18858752/SRR18858752_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/046/SRR18858746/SRR18858746_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/085/SRR18858785/SRR18858785_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/053/SRR18858753/SRR18858753_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/047/SRR18858747/SRR18858747_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/079/SRR18858779/SRR18858779_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/076/SRR18858776/SRR18858776_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/070/SRR18858770/SRR18858770_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/071/SRR18858771/SRR18858771_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/055/SRR18858755/SRR18858755_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/056/SRR18858756/SRR18858756_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/061/SRR18858761/SRR18858761_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/062/SRR18858762/SRR18858762_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/083/SRR18858783/SRR18858783_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/049/SRR18858749/SRR18858749_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/095/SRR18858795/SRR18858795_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/078/SRR18858778/SRR18858778_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/054/SRR18858754/SRR18858754_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/066/SRR18858766/SRR18858766_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/093/SRR18858793/SRR18858793_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/081/SRR18858781/SRR18858781_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/078/SRR18858778/SRR18858778_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/000/SRR18858800/SRR18858800_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/084/SRR18858784/SRR18858784_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/072/SRR18858772/SRR18858772_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/066/SRR18858766/SRR18858766_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/048/SRR18858748/SRR18858748_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/054/SRR18858754/SRR18858754_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/096/SRR18858796/SRR18858796_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/051/SRR18858751/SRR18858751_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/093/SRR18858793/SRR18858793_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/081/SRR18858781/SRR18858781_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/063/SRR18858763/SRR18858763_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/069/SRR18858769/SRR18858769_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/084/SRR18858784/SRR18858784_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/045/SRR18858745/SRR18858745_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/087/SRR18858787/SRR18858787_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/060/SRR18858760/SRR18858760_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/057/SRR18858757/SRR18858757_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/096/SRR18858796/SRR18858796_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/072/SRR18858772/SRR18858772_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/075/SRR18858775/SRR18858775_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/048/SRR18858748/SRR18858748_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/099/SRR18858799/SRR18858799_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/000/SRR18858800/SRR18858800_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/045/SRR18858745/SRR18858745_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/087/SRR18858787/SRR18858787_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/091/SRR18858791/SRR18858791_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/063/SRR18858763/SRR18858763_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/090/SRR18858790/SRR18858790_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/069/SRR18858769/SRR18858769_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/076/SRR18858776/SRR18858776_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/060/SRR18858760/SRR18858760_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/056/SRR18858756/SRR18858756_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/062/SRR18858762/SRR18858762_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/052/SRR18858752/SRR18858752_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/046/SRR18858746/SRR18858746_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/086/SRR18858786/SRR18858786_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/089/SRR18858789/SRR18858789_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/088/SRR18858788/SRR18858788_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/074/SRR18858774/SRR18858774_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/098/SRR18858798/SRR18858798_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/097/SRR18858797/SRR18858797_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/080/SRR18858780/SRR18858780_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/082/SRR18858782/SRR18858782_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/050/SRR18858750/SRR18858750_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/073/SRR18858773/SRR18858773_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/064/SRR18858764/SRR18858764_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/065/SRR18858765/SRR18858765_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/058/SRR18858758/SRR18858758_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/059/SRR18858759/SRR18858759_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/068/SRR18858768/SRR18858768_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/067/SRR18858767/SRR18858767_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/079/SRR18858779/SRR18858779_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/053/SRR18858753/SRR18858753_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/067/SRR18858767/SRR18858767_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/065/SRR18858765/SRR18858765_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/094/SRR18858794/SRR18858794_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/055/SRR18858755/SRR18858755_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/070/SRR18858770/SRR18858770_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/082/SRR18858782/SRR18858782_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/092/SRR18858792/SRR18858792_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/077/SRR18858777/SRR18858777_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/083/SRR18858783/SRR18858783_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/089/SRR18858789/SRR18858789_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/080/SRR18858780/SRR18858780_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/095/SRR18858795/SRR18858795_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/085/SRR18858785/SRR18858785_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/097/SRR18858797/SRR18858797_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/071/SRR18858771/SRR18858771_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/049/SRR18858749/SRR18858749_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/061/SRR18858761/SRR18858761_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/059/SRR18858759/SRR18858759_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/073/SRR18858773/SRR18858773_2.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/047/SRR18858747/SRR18858747_1.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR188/094/SRR18858794/SRR18858794_2.fastq.gzprimary200OKGenomicsAuburn Universityhttps://www.ebi.ac.uk/ena/browser/view/PRJNA830517Male layer type chickens were infected with Ascaridia galli eggs. The birds cleared the infection by week seven after the infection. The jejunal microbiota of infected and control birds were tested weekly from one week after the infection to eight weeks after the infection.ENAchicken, Microbiome., Microbial Community Composition, Community Composition, Microbiomes, Microbial Community Compositions, Microbial Community, Gallus gallus domesticus, Microbial Community Structure, Community Structure, Infestations and Infections, Infection and Infestation, Ascaris galli, Microbial, clinical infection, Phasianus gallus, Gallus gallus, Human, Composition, Infestation and Infection, Gallus domesticus, Infection, chickens, Microbial Community Structures, Microbiotas, bantam, Infections and Infestations, Chicken, Human Microbiomes, Microbial Communities, Community, Human Microbiome, MicrobiomefalseInfluence of infection with Ascaridia galli on the chicken intestinal microbiome2023-05-192022-04-26PRJNA830517