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However, a low-cost and high-throughput chromatin profiling method in vivo is still lacked in plants. Here, we developed a transient and simplified CUT&Tag method (tsCUT&Tag) that combines transient expression of transcription factor proteins in protoplasts with a simplified CUT&Tag without nucleus extraction. tsCUT&Tag exhibited better data quality and higher signal resolution with lower sequencing depth compared to traditional ChIP-seq. Furthermore, we proved a strategy combining tsCUT&Tag with deep learning which has great potentials for profiling TFBL across the whole life cycle of plants."],"repository":["ENA"],"description_synonyms":["TF binding., Costs, fees, covalent modifier, Procedures, Analyses, Cost Measures, Cost, Cost-Minimization Analyses, Affordability, transcription regulator binding, Cost-Minimization Analysis, salaries, Measures, Comparison, Cost Comparisons, Pricing, Methodological, financing, Measure, Procedure, Methodological Study, Cost-Minimization, plan specification, Study, Cost Analysis, funding, cost, method, Techniques, Methodological Studies, Cost Minimization Analysis, Method, method used in an experiment, Studies, Analysis, Comparisons, financial management, Cost Measure, Affordabilities, Cost Comparison, TAG, Technique, finances, Cost Analyses, Costs and Cost Analyses"],"additional_accession":[]},"is_claimable":false,"name":"","description":"A cost-effective tsCUT&Tag method for profiling transcription factor binding landscape","dates":{"last_updated":"2023-05-19","first_public":"2022-04-27"},"accession":"PRJNA831335","cross_references":{}}