<HashMap><database>ENA</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Genomics</omics_type><center_name>Schober Lab, Mikrobiologisches Institut - Klinische Mikrobiologie, Immunologie und Hygiene, Friedrich-Alexander-Universität Erlangen-Nürnberg</center_name><full_dataset_link>https://www.ebi.ac.uk/ena/browser/view/PRJNA843995</full_dataset_link><scientific_name>Homo sapiens</scientific_name><long_description>T cell receptor (TCR) avidity is assumed to be a major determinant of the spatiotemporal fate and protective capacity of tumor-specific T cells. However, monitoring polyclonal T cell responses with known TCR avidities in vivo over space and time remains challenging. Here, we investigated the fate and functionality of tumor neoantigen-specific T cells with TCRs of distinct avidities in a well-established, reductionist preclinical tumor model and human melanoma patients. Surprisingly, we found that both high- and low-avidity T cells are similarly abundant within the tumor and adopt concordant phenotypic signs of exhaustion. Outside the tumor, high-avidity TCR T cells were also not generally overrepresented, but instead selectively enriched in T cell populations with intermediate PD-1 protein expression or corresponding RNA and surface protein signatures of recent activation. Tumor-reactive TCRs with high protective capacity circulating in peripheral blood are therefore characterized by a signature of recent activation. Overall design: scRNA sequencing data for antigen specific cells before and after TIL infusion and from the infusion product of melanoma patients</long_description><tag>xref:PubMed:35960818</tag><repository>ENA</repository></additional><is_claimable>false</is_claimable><name>Signatures of recent activation identify a circulating T cell compartment containing tumor-specific antigen receptors with high avidity</name><description>Signatures of recent activation identify a circulating T cell compartment containing tumor-specific antigen receptors with high avidity</description><dates><last_updated>2025-09-24</last_updated><first_public>2022-06-04</first_public></dates><accession>PRJNA843995</accession><cross_references><GEO>GSE205145</GEO><taxon>9606</taxon><PubMed>35960818</PubMed></cross_references></HashMap>