{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/058/SRR24542358/SRR24542358_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/056/SRR24542356/SRR24542356_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/052/SRR24542352/SRR24542352_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/052/SRR24542352/SRR24542352_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/060/SRR24542360/SRR24542360_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/058/SRR24542358/SRR24542358_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/057/SRR24542357/SRR24542357_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/055/SRR24542355/SRR24542355_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/054/SRR24542354/SRR24542354_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/059/SRR24542359/SRR24542359_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/055/SRR24542355/SRR24542355_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/053/SRR24542353/SRR24542353_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/060/SRR24542360/SRR24542360_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/054/SRR24542354/SRR24542354_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/056/SRR24542356/SRR24542356_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/059/SRR24542359/SRR24542359_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/057/SRR24542357/SRR24542357_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR245/053/SRR24542353/SRR24542353_1.fastq.gz"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["China Agricultural University"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJNA972302"],"scientific_name":["Solanum lycopersicum"],"long_description":["In order to study the role of SlLBD40 and WRKY37 in seed germination, we established two gene knockout lines respectively. We then used RNA-seq data from seeds 6 h after imbibition of WT and two gene knockout lines for gene expression profiling. Overall design: Comparative gene expression profiling analysis of RNA-seq data for WRKY37 and SlLBD40 knockout lines and WT seeds after 6h of imbibition."],"repository":["ENA"],"description_synonyms":["MGC130048, Elaiosomes, Profiling, Transcriptome, SGCG_HUMAN, 35 kDa dystrophin-associated glycoprotein, Solanum esculentum Dunal, Tomato, Lycopersicum esculentum, SG-gamma, Monitorings, A4, Gene, Tomatoes, TYPE, SGCG, Solanum esculentum, LGMD2C, Gene Expression Profilings, DAGA4, Gene Expression, Differential Display, Transcript Expression Analysis, mRNA Differential Displays, Transcript Expression Analyses, Solanum lycopersicum var. humboldtii, Gene Expression Pattern Analysis, Embryos, 35DAG, Gene Expression Monitorings, sarcoglycan, Analysis, Profilings, Seed, MAM, gamma-SG, Elaiosome, mRNA Differential Display, SCG3, gamma sarcoglycan, Embryo, Gene Expression Monitoring, Diaspore, Transcriptome Profiling, DMDA1, Analyses, mRNA, Solanum lycopersicum L., tomato, Transcriptome Profilings, Plant, Plant Embryo, Transcriptomics, Plant Zygote, Zygote, Differential Displays, Lycopersicon esculentum, Transcript Expression, Transcriptome Analysis, Lycopersicon esculentum var. esculentum, gamma (35kDa dystrophin-associated glycoprotein), Plant Embryos, Transcriptome Analyses, Monitoring, Plant., Gene Expression Analysis, DMDA, Gene Expression Analyses, Plant Zygotes, 35kD dystrophin-associated glycoprotein, Diaspores, Lycopersicon lycopersicum, SCARMD2, gamma-sarcoglycan, Zygotes, Expression Analysis, Expression Analyses, Solanum lycopersicon, Lycopersicon esculentum Mill."],"name_synonyms":["MGC130048, Elaiosomes, Profiling, Transcriptome, SGCG_HUMAN, 35 kDa dystrophin-associated glycoprotein, Solanum esculentum Dunal, Tomato, Lycopersicum esculentum, SG-gamma, Monitorings, A4, Gene, Tomatoes, TYPE, SGCG, Solanum esculentum, LGMD2C, Gene Expression Profilings, DAGA4, Gene Expression, Differential Display, Transcript Expression Analysis, mRNA Differential Displays, Transcript Expression Analyses, Solanum lycopersicum var. humboldtii, Gene Expression Pattern Analysis, Embryos, 35DAG, Gene Expression Monitorings, sarcoglycan, Analysis, Profilings, Seed, MAM, gamma-SG, Elaiosome, mRNA Differential Display, SCG3, gamma sarcoglycan, Embryo, Gene Expression Monitoring, Diaspore, Transcriptome Profiling, DMDA1, Analyses, mRNA, Solanum lycopersicum L., tomato, Transcriptome Profilings, Plant, Plant Embryo, Transcriptomics, Plant Zygote, Zygote, Differential Displays, Lycopersicon esculentum, Transcript Expression, Transcriptome Analysis, Lycopersicon esculentum var. esculentum, gamma (35kDa dystrophin-associated glycoprotein), Plant Embryos, Transcriptome Analyses, Monitoring, Plant., Gene Expression Analysis, DMDA, Gene Expression Analyses, Plant Zygotes, 35kD dystrophin-associated glycoprotein, Diaspores, Lycopersicon lycopersicum, SCARMD2, gamma-sarcoglycan, Zygotes, Expression Analysis, Expression Analyses, Solanum lycopersicon, Lycopersicon esculentum Mill."],"additional_accession":[]},"is_claimable":false,"name":"Transcriptome analysis of wild type, slbd40 and slwrky37 tomato seeds after imbibition.","description":"Transcriptome analysis of wild type, slbd40 and slwrky37 tomato seeds after imbibition.","dates":{"last_updated":"2025-09-24","first_public":"2023-09-02"},"accession":"PRJNA972302","cross_references":{"GEO":["GSE232485"],"taxon":["4081"]}}