Transcriptomics

Dataset Information

180

Transcription profiling by array of Arabidopsis wild type and MYB knock out plants


ABSTRACT: Comparing the gene expression patterns between wild type plant (Col-0) and MYB knock-out plants.

REANALYSED by: E-ATMX-6

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Akane Suzuki  

PROVIDER: E-ATMX-6 | ArrayExpress | 2007-03-14

REPOSITORIES: ArrayExpress

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Publications

Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis.

Hirai Masami Yokota MY   Sugiyama Kenjiro K   Sawada Yuji Y   Tohge Takayuki T   Obayashi Takeshi T   Suzuki Akane A   Araki Ryoichi R   Sakurai Nozomu N   Suzuki Hideyuki H   Aoki Koh K   Goda Hideki H   Nishizawa Osamu Ishizaki OI   Shibata Daisuke D   Saito Kazuki K  

Proceedings of the National Academy of Sciences of the United States of America 20070409 15


Understanding plant metabolism as an integrated system is essential for metabolic engineering aimed at the effective production of compounds useful to human life and the global environment. The "omics" approach integrates transcriptome and metabolome data into a single data set and can lead to the identification of unknown genes and their regulatory networks involved in metabolic pathways of interest. One of the intriguing, although poorly described metabolic pathways in plants is the biosynthes  ...[more]

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