Transcriptomics

Dataset Information

8

Cytokinin induction of roots and shoots


ABSTRACT: Arabidopsis Col-0 seedlings grown in liquid culture to growth stage 1.0 were treated with 5 µM Benzyladenine and incubated for the indicated time points. Roots and shoots of the seedlings were then harvested separately by taking each individual seedling with a soft forceps at the hypocotyl, dipping it into liquid nitrogen and breaking off the root at the inner wall of a collection tube that was swimming in liquid nitrogen. The shoot part was then striped from the forceps at the edge of another collection tubes.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Wolfram Brenner  

PROVIDER: E-CAGE-111 | ArrayExpress | 2011-06-20

REPOSITORIES: ArrayExpress

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Publications

Summarizing and exploring data of a decade of cytokinin-related transcriptomics.

Brenner Wolfram G WG   Schmülling Thomas T  

Frontiers in plant science 20150217


The genome-wide transcriptional response of the model organism Arabidopsis thaliana to cytokinin has been investigated by different research groups as soon as large-scale transcriptomic techniques became affordable. Over the last 10 years many transcriptomic datasets related to cytokinin have been generated using different technological platforms, some of which are published only in databases, culminating in an RNA sequencing experiment. Two approaches have been made to establish a core set of c  ...[more]

Publication: 1/2

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