Transcriptomics

Dataset Information

2

The genome of Streptomyces rimosus shows a novel structure compared to other Streptomyces


ABSTRACT: This study compared the genome of Streptomyces rimosus rimosus against that of Streptomyces coelicolor. It also compared 4 strains with changes in oxytetracycline production and derived from G7, the type strain, against G7. Duplicate samples, each replicate may be found in the corresponding supplementary file for the Sample

SUBMITTER: Iain Hunter  Gan Teng-Kuei  Emma Tilley  Ralph Kirby  Paul Herron 

PROVIDER: E-GEOD-10126 | ArrayExpress | 2010-05-26

SECONDARY ACCESSION(S): GSE10126PRJNA108673

REPOSITORIES: GEO, ArrayExpress

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Publications

The genome of Streptomyces rimosus subsp. rimosus shows a novel structure compared to other Streptomyces using DNA/DNA microarray analysis.

Kirby Ralph R   Gan Teng-Kuei TK   Hunter Iain I   Herron Paul P   Tilley Emma E  

Antonie van Leeuwenhoek 20080227 2


DNA/DNA genome microarray analysis together with genome sequencing suggests that the genome of members of the genus Streptomyces would seem to have a common structure including a linear genomic structure, a core of common syntenous Actinomycete genes, the presence of species specific terminal regions and two intermediate group of syntenous genes that seem to be genus specific. We analyzed Streptomyces species using DNA/DNA microarray comparative genome analysis. Only Streptomyces rimosus failed  ...[more]

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