Transcriptomics

Dataset Information

4

Transcription profiling of pig muscle longissimus dorsi sample from F2 animals


ABSTRACT: In this study, we used correlation analysis of the expression profiles and drip loss to produce a list of functional candidate genes under the assumption that genes with strong correlation between their expression values and drip belong to pathways or networks relevant for the control of the trait. Expression QTL analyses for transcripts showing trait dependent expression were done in order to identify genes which show trait associated expression, map to pQTL regions, and exhibit cis regulation. Experiment Overall Design: 74 F2 animals of a resource population based on the breeds Duroc and Pietrain known to differ in meat quality and quantity traits were hybridized to Affymetrix Porcine Genome Arrays.

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Sus scrofa  

SUBMITTER: Klaus Wimmers  

PROVIDER: E-GEOD-10204 | ArrayExpress | 2009-01-14

SECONDARY ACCESSION(S): GSE10204PRJNA108323

REPOSITORIES: GEO, ArrayExpress

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