Genomics

Dataset Information

2

Transcription profiling of Pseudomonas aeruginosa exposed to toxicogenomic effects of ortho-phenylphenol


ABSTRACT: In the present study, we employed Affymetrix Pseudomonas aeruginosa GeneChip arrays to investigate the dynamics of global gene expression profiles during the cellular response of Pseudomonas aeruginosa to ortho-phenylphenol, which involved initial growth inhibition and metabolism. Experiment Overall Design: We conducted four independent microarray experiments (biological replicates) in the absence (control) and the presence (experimental) of ortho-phenylphenol. We calculated fold change as the ratio between the signal averages of four untreated (control) and four ortho-phenylphenol-treated (experimental) cultures for 0, 20 and 60 min exposures.

INSTRUMENT(S): 418 [Affymetrix]

ORGANISM(S): Pseudomonas aeruginosa  

SUBMITTER: Hyeung-Jin Jang  

PROVIDER: E-GEOD-10604 | ArrayExpress | 2008-06-11

SECONDARY ACCESSION(S): GSE10604PRJNA107771

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-10604.README.txt Txt
E-GEOD-10604.eSet.r Other
E-GEOD-10604.idf.txt Idf
E-GEOD-10604.processed.1.zip Processed
E-GEOD-10604.raw.1.zip Raw
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