Transcriptomics

Dataset Information

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Transcriptome analysis of rice in relation to infection with rice tungro spherical virus (RTSV)


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE16140: Transcriptome analysis of rice (Oryza sativa cv.TW16) in relation to infection with rice tungro spherical virus (RTSV) GSE16141: Transcriptome analysis of rice (Oryza sativa cv. Taichung Native 1) in relation to infection with RTSV Refer to individual Series

ORGANISM(S): Oryza sativa Indica Group  

SUBMITTER: Kouji Satoh 

PROVIDER: E-GEOD-16142 | ArrayExpress | 2010-05-18

SECONDARY ACCESSION(S): GSE16142PRJNA115043

REPOSITORIES: GEO, ArrayExpress

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Publications

Single nucleotide polymorphisms in a gene for translation initiation factor (eIF4G) of rice (Oryza sativa) associated with resistance to Rice tungro spherical virus.

Lee Jong-Hee JH   Muhsin Muhammad M   Atienza Genelou A GA   Kwak Do-Yeon DY   Kim Suk-Man SM   De Leon Teresa B TB   Angeles Enrique R ER   Coloquio Edgardo E   Kondoh Hiroaki H   Satoh Kouji K   Cabunagan Rogelio C RC   Cabauatan Pepito Q PQ   Kikuchi Shoshi S   Leung Hei H   Choi Il-Ryong IR  

Molecular plant-microbe interactions : MPMI 20100101 1


Rice tungro disease (RTD) is a serious constraint to rice production in South and Southeast Asia. RTD is caused by Rice tungro spherical virus (RTSV) and Rice tungro bacilliform virus. Rice cv. Utri Merah is resistant to RTSV. To identify the gene or genes involved in RTSV resistance, the association of genotypic and phenotypic variations for RTSV resistance was examined in backcross populations derived from Utri Merah and rice germplasm with known RTSV resistance. Genetic analysis revealed that  ...[more]

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