Transcriptomics,Multiomics

Dataset Information

18

MiRNA expression in LNCaP, PC3, Du-145 and RWPE-1 cell lines


ABSTRACT: MiRNAs are small non-coding RNAs that regulate the expression of specific mRNA targets mainly by translational repression, mRNA deadenylation or cleavage. This series is meant to identify miRNAs deregulated in prostate cancer (PCa) by comparing the PCa cell lines LNCaP, PC3 and Du-145 to the normal prostate epithelial cell line RWPE-1. We analyzed three arrays each for LNCaP, PC3, Du-145 and RWPE-1 cell lines

OTHER RELATED OMICS DATASETS IN: PRJNA123605PRJNA123603PRJNA127757PRJNA119083

ORGANISM(S): Homo Sapiens

SUBMITTER: Martin v Bergen   Gerald Verhaegh  Nora Mörbt  Friedemann Horn  Janina Tomm  Kristin Reiche  Kerstin Boll  Katharina Schutt  Jack Schalken  Jörg Hackermüller  Antje K Kretzschmar 

PROVIDER: E-GEOD-17317 | ArrayExpress | 2012-03-08

SECONDARY ACCESSION(S): GSE17317PRJNA123605

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-17317.README.txt Txt
E-GEOD-17317.idf.txt Idf
E-GEOD-17317.processed.1.zip Processed
E-GEOD-17317.raw.1.zip Raw
E-GEOD-17317.sdrf.txt Txt
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Publications

MiR-130a, miR-203 and miR-205 jointly repress key oncogenic pathways and are downregulated in prostate carcinoma.

Boll K K   Reiche K K   Kasack K K   Mörbt N N   Kretzschmar A K AK   Tomm J M JM   Verhaegh G G   Schalken J J   von Bergen M M   Horn F F   Hackermüller J J  

Oncogene 20120305 3


With ∼30 000 deaths annually in the United States, prostate cancer (PCa) is a major oncologic disease. Here we show that the microRNAs miR-130a, miR-203 and miR-205 jointly interfere with the two major oncogenic pathways in prostate carcinoma and are downregulated in cancer tissue. Using transcriptomics we show that the microRNAs repress several gene products known to be overexpressed in this cancer. Argonaute 2 (AGO2) co-immunoprecipitation, reporter assays and western blot analysis demonstrate  ...[more]

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