Transcriptomics

Dataset Information

4

Identification of Sfh and H-NS binding sites in the Salmonella Typhimurium genome


ABSTRACT: The global regulator H-NS represses transcription in gram negative bacteria. Sfh is a homologue of H-NS and is encoded by plasmid pSfR27. Sfh provides a 'stealth' function that allows pSfR27 to be transmitted to a new host without disrupting the competitive fitness of the new host We used ChIP-on-chip to profile Sfh (3xFLAG-tagged) and H-NS binding sites in Salmonella Typhimurium strain SL1344 and found that Sfh provides its 'stealth' function by targeting a sub-set of H-NS bound genes that display reduced levels of H-NS occupancy with the SL1344 chromosome upon acquisition of plasmid pSfR27 Identification of Sfh binding sites in strains SL1344 (pSfR27) and SL1344 hns (pSfR27) as well as identification of H-NS binding sites in strains SL1344, SL1344 (pSfR27), and SL1344 (pSfR27) sfh

ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium  

SUBMITTER: Charles J Dorman   Jay C Hinton   Andrew D Cameron  Sacha Lucchini  Shane C Dillon  Karsten Hokamp  Shane Dillon 

PROVIDER: E-GEOD-19231 | ArrayExpress | 2010-05-18

SECONDARY ACCESSION(S): GSE19231PRJNA123763

REPOSITORIES: GEO, ArrayExpress

Similar Datasets

2015-02-26 | E-GEOD-66288 | ArrayExpress
2012-02-16 | E-GEOD-35826 | ArrayExpress
2012-02-16 | E-GEOD-35827 | ArrayExpress
2014-03-27 | E-GEOD-49914 | ArrayExpress
2010-05-19 | E-GEOD-19155 | ArrayExpress
2009-03-13 | E-MEXP-1880 | ArrayExpress
2009-12-05 | GSE19231 | GEO
2012-11-01 | E-GEOD-41936 | ArrayExpress
2010-05-18 | E-GEOD-19230 | ArrayExpress
2010-09-01 | E-MTAB-332 | ArrayExpress