Transcriptomics

Dataset Information

2

H3K4me2-Millipore.BG3


ABSTRACT: modENCODE_submission_2654 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determe the locations of 125 chromosomal proteins and histone modifications across the Drosophila melanogaster genome. The proteins and modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Keywords: CHIP-chip EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Cell Line: ML-DmBG3-c2; Tissue: CNS-derived cell-line; Developmental Stage: third instar larval stage; Genotype: y v f mal; Sex: Unknown; NUMBER OF REPLICATES: 4; EXPERIMENTAL FACTORS: Cell Line ML-DmBG3-c2; Antibody H3K4me2-Millipore (target is H3K4me2)

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Nicole Riddle   Gary Karpen  DCC modENCODE  Vincenzo Pirrotta  Andrey Gortchakov  Art Alekseyenko  Greg Shanower  Michael Tolstorukov  Sarah Elgin  Aki Minoda  Mitzi Kuroda  Cameron Kennedy  Peter Park  Yuri Schwartz  Peter Kharchenko 

PROVIDER: E-GEOD-23469 | ArrayExpress | 2010-08-10

SECONDARY ACCESSION(S): GSE23469

REPOSITORIES: GEO, ArrayExpress

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