Transcriptomics

Dataset Information

4

H3K9me2-Ab2 (new lot).2-4 hr OR embryo


ABSTRACT: modENCODE_submission_2662 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determe the locations of 125 chromosomal proteins and histone modifications across the Drosophila melanogaster genome. The proteins and modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Keywords: CHIP-chip EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: Oregon-R; Developmental Stage: Embryo 2-4hr OR; Genotype: wild type; NUMBER OF REPLICATES: 8; EXPERIMENTAL FACTORS: Strain Oregon-R; Antibody H3K9me2-Ab2 (new lot) (target is H3K9me2); Developmental Stage Embryo 2-4hr OR

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Nicole Riddle   Gary Karpen  DCC modENCODE  Vincenzo Pirrotta  Art Alekseyenko  Andrey Gortchakov  Greg Shanower  Michael Tolstorukov  Sarah Elgin  Aki Minoda  Mitzi Kuroda  Cameron Kennedy  Peter Park  Yuri Schwartz  Peter Kharchenko 

PROVIDER: E-GEOD-23477 | ArrayExpress | 2010-08-10

SECONDARY ACCESSION(S): GSE23477

REPOSITORIES: GEO, ArrayExpress

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