Transcriptomics

Dataset Information

3

Expression Analysis of Rice Chromosome 4 Using Tiling Microarray


ABSTRACT: We analyzed the transcriptional activity of rice chromosom 4 using a tiling path microarray based on PCR-generated genomic DNA fragments. Five organ samples from various developmental stages and cultured cells were examined.

ORGANISM(S): Oryza sativa  

SUBMITTER: Xiangfeng Wang   Suliang Yu   Yuling Jiao   Bin Han  Peixin Jia 

PROVIDER: E-GEOD-2358 | ArrayExpress | 2010-06-10

SECONDARY ACCESSION(S): GSE2358PRJNA91657

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-2358.README.txt Txt
E-GEOD-2358.idf.txt Idf
E-GEOD-2358.processed.1.zip Processed
E-GEOD-2358.sdrf.txt Txt
Items per page:
1 - 4 of 4
altmetric image

Publications

A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription.

Jiao Yuling Y   Jia Peixin P   Wang Xiangfeng X   Su Ning N   Yu Shuliang S   Zhang Dongfen D   Ma Ligeng L   Feng Qi Q   Jin Zhaoqing Z   Li Lei L   Xue Yongbiao Y   Cheng Zhukuan Z   Zhao Hongyu H   Han Bin B   Deng Xing Wang XW  

The Plant cell 20050429 6


The complete genome sequence of cultivated rice (Oryza sativa) provides an unprecedented opportunity to understand the biology of this model cereal. An essential and necessary step in this effort is the determination of the coding information and expression patterns of each sequenced chromosome. Here, we report an analysis of the transcriptional activity of rice chromosome 4 using a tiling path microarray based on PCR-generated genomic DNA fragments. Six representative rice organ types were exam  ...[more]

Similar Datasets

2010-06-10 | E-GEOD-2360 | ArrayExpress
2010-09-09 | E-GEOD-9047 | ArrayExpress
2010-09-09 | E-GEOD-9048 | ArrayExpress
2010-06-05 | E-GEOD-1262 | ArrayExpress
2010-06-24 | E-GEOD-14565 | ArrayExpress
2010-06-25 | E-GEOD-13219 | ArrayExpress
2010-07-16 | E-GEOD-22675 | ArrayExpress
2007-08-14 | E-GEOD-8754 | ArrayExpress
2010-06-10 | E-GEOD-2452 | ArrayExpress
2010-06-05 | E-GEOD-1808 | ArrayExpress