Transcriptomics

Dataset Information

3

Temporal transcriptomic analysis of the Arabidopsis thaliana - Botrytis cinerea interaction


ABSTRACT: Transcriptional profiling of Arabidopsis leaves comparing mock-treated leaves with Botrytis cinerea infected leaves over a time-course (12 and 24 hrs). Two-condition experiment, Mock-treated vs infected leaves. Biological replicates: 5 Mock-treated, 5 infected, independently grown and harvested. One replicate per array.

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Joseph Mulema   Joseph Mary Kusasira Mulema  Katherine Denby 

PROVIDER: E-GEOD-24445 | ArrayExpress | 2011-03-01

SECONDARY ACCESSION(S): GSE24445PRJNA132685

REPOSITORIES: GEO, ArrayExpress

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Publications

Spatial and temporal transcriptomic analysis of the Arabidopsis thaliana-Botrytis cinerea interaction.

Mulema Joseph M K JM   Denby Katherine J KJ  

Molecular biology reports 20110723 4


Plants activate an array of defence responses following recognition of pathogenic organisms. This study attempted to characterize at a transcriptional level, the defence responses of Arabidopsis thaliana after infection with Botrytis cinerea using microarrays. Alteration in transcript levels following infection was investigated in time (temporal) and space (spatial). A number of genes were up- and down-regulated specifically at 12 h, others at 24 h while others were up- and down-regulated at bot  ...[more]

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