Transcriptomics

Dataset Information

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Chip in silencing suppressor plants or in mirna plants-Transcriptional and post-transcriptional changes in Arabidopsis plants that constitutively express suppressors of RNA silencing


ABSTRACT: gen107_ptgs - chip in silencing suppressor plants or in mirna plants - What are the genes that are differentially regulated in various tissues derived from silencing suppressor plants or miRNA mutants? - How are the histone modifications and the chromatin structure in miRNA mutants or in silencing suppressor plants? 12 dye-swap - CHROMO4_2 arrays - ChIP-chip

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Agnes Yu   Olivier Voinnet  Jean-Pierre Renou  Vincent Colot  Marie-Laure Martin-Magniette  Véronique BRUNAUD 

PROVIDER: E-GEOD-24692 | ArrayExpress | 2011-08-22

SECONDARY ACCESSION(S): GSE24692PRJNA133629

REPOSITORIES: GEO, ArrayExpress

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Publications

Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis.

Jay Florence F   Wang Yu Y   Yu Agnès A   Taconnat Ludivine L   Pelletier Sandra S   Colot Vincent V   Renou Jean-Pierre JP   Voinnet Olivier O  

PLoS pathogens 20110512 5


In Arabidopsis, micro (mi)RNAs and trans-acting (ta-si)RNAs synthesized directly or indirectly through the DICER-LIKE-1 (DCL1) ribonuclease have roles in patterning and hormonal responses, while DCL2,3,4-dependent small-interfering (si)RNAs are mainly involved in silencing of transposable elements and antiviral defense. Viral suppressors of RNA silencing (VSRs) produced by phytoviruses to counter plant defense may perturb plant developmental programs because of the collision of their inhibitory  ...[more]

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