Transcriptomics,Genomics

Dataset Information

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Dynamic combinatorial interactions of RUNX1 and cooperating partners regulates megakaryocytic differentiation in cell line models


ABSTRACT: This SuperSeries is composed of the following subset Series: GSE24777: Regulation of Megakaryocytic differentiation in Cell Line Models by Dynamic Combinatorial Interactions of RUNX1 with Its Cooperating Partners GSE24778: Expresssion data in K562 cells, before and after TPA induction and including a RUNX1 knockout construct or a control structure Refer to individual Series

ORGANISM(S): Homo sapiens  

SUBMITTER: Ram Jaschek   

PROVIDER: E-GEOD-24779 | ArrayExpress | 2011-01-10

SECONDARY ACCESSION(S): GSE24779PRJNA132223

REPOSITORIES: GEO, ArrayExpress

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Publications

Dynamic combinatorial interactions of RUNX1 and cooperating partners regulates megakaryocytic differentiation in cell line models.

Pencovich Niv N   Jaschek Ram R   Tanay Amos A   Groner Yoram Y  

Blood 20101019 1


Specific interactions of transcription factors (TFs) with their targets are crucial for specifying gene expression programs during cell differentiation. How specificity is maintained despite limited selectivity of individual TF-DNA interactions is not fully understood. RUNX1 TF is among the most frequently mutated genes in human leukemia and an important regulator of megakaryopoiesis. We used megakaryocytic cell lines to characterize the network of RUNX1 targets and cooperating TFs in differenti  ...[more]

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