Transcriptomics

Dataset Information

4

Expression data from HAART interruption in HIV patients


ABSTRACT: We evaluated longitudinal changes in viral replication and emergence of viral variants in the context of T cell homeostasis and gene expression in GALT of three HIV-positive patients who initiated HAART during primary HIV infection but opted to interrupt therapy thereafter. Longitudinal viral sequence analysis revealed that a stable proviral reservoir was established in GALT during primary HIV infection that persisted through early HAART and post-therapy interruption. Proviral variants in GALT and peripheral blood mononuclear cells (PBMCs) displayed low levels of genomic diversity at all times. A rapid increase in viral loads with a modest decline of CD4 T cells in peripheral blood was observed, while gut mucosal CD4 T cell loss was severe following HAART interruption. This was accompanied by increased mucosal gene expression regulating interferon (IFN)-mediated antiviral responses and immune activation, a profile similar to those found in HAART-naive HIV-infected patients. Gut mucosal responses to HAART interruption were evaluated with Affymetrix arrays

ORGANISM(S): Homo sapiens  

SUBMITTER: Michael D George   Michael George 

PROVIDER: E-GEOD-28177 | ArrayExpress | 2011-03-25

SECONDARY ACCESSION(S): GSE28177PRJNA139527

REPOSITORIES: GEO, ArrayExpress

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