Transcriptomics

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L. plantarum grown in a variety of different fermentation conditions


ABSTRACT: Lactobacillus plantarum WCFS1 was differentially fermented in 29 different fermentations according to a factorial, combinatorial scheme that included variations in growth temperature (28 or 37C), NaCl concentration (0 or 0.3M), pH (5.2, 5.8, 6.4), as well as oxygen (N2 or air) and amino acid availability (1.1 or 2x concentration). Samples were hybridized in a star design using five samples in the center all connected to each other. The remaining samples were linked (evenly distributed) to the samples in the inner circle in a loop design with additional links (shortcuts) to the center sample. All samples were hybridized in duplicate (at minimum) using each of the two dyes (Cy3/Cy5) at least once per sample.

ORGANISM(S): Lactobacillus plantarum  

SUBMITTER: Peter A Bron   Michiel Kleerebezem  Maria Marco  Roger Bongers  Lex Overmars  Michiel Wels  Anne Wiersma 

PROVIDER: E-GEOD-31076 | ArrayExpress | 2011-09-30

SECONDARY ACCESSION(S): GSE31076PRJNA144721

REPOSITORIES: GEO, ArrayExpress

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