Transcriptomics

Dataset Information

4

Gene expression profile after oral vaccination against infectious pancreatic necrosis virus (IPNV)


ABSTRACT: Oral immunization of trout against infectious pancreatic necrosis virus (IPNV) have been recently reported by using a DNA vector coding the viral capsid VP2 gene encapsulated in alginate microspheres. We report here an study of the transcripts in head kidney and pyloric ceca 7 days after oral vaccination of rainbow trout by using a newly designed rainbow trout 60-mer oligo microarray focused in their immune-related genes. Trout were obtained from 4 different farms, one group of trout was defined as belonging to one of the farms. Each of the trout 4 groups were divided into two subgroups of 6 trout for each subgroup. Subgroup I was orally vaccinated with 10 µl of suspension of the vaccine microspheres each containing 10 µg of pcDNA-VP2 diluted in 10µl of PBS, while subgroup II received similar microspheres suspension but pcDNA. Head kidney and pyloric ceca were collected from each subgroup and RNA was extracted.

ORGANISM(S): Oncorhynchus mykiss  

SUBMITTER: Julio M Coll  

PROVIDER: E-GEOD-31591 | ArrayExpress | 2012-07-18

SECONDARY ACCESSION(S): GSE31591PRJNA145609

REPOSITORIES: GEO, ArrayExpress

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Publications

Oral immunization of rainbow trout to infectious pancreatic necrosis virus (Ipnv) induces different immune gene expression profiles in head kidney and pyloric ceca.

Ballesteros Natalia A NA   Saint-Jean Sylvia S Rodriguez SS   Encinas Paloma A PA   Perez-Prieto Sara I SI   Coll Julio M JM  

Fish & shellfish immunology 20120410 2


Induction of neutralizing antibodies and protection by oral vaccination with DNA-alginates of rainbow trout Oncorhynchus mykiss against infectious pancreatic necrosis virus (IPNV) was recently reported. Because orally induced immune response transcript gene profiles had not been described yet neither in fish, nor after IPNV vaccination, we studied them in head kidney (an immune response internal organ) and a vaccine entry tissue (pyloric ceca). By using an oligo microarray enriched in immune-rel  ...[more]

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