Transcriptomics

Dataset Information

4

Investigation of Isogenic Human Embryonic Stem Cells and Derived Induced Pluripotent Stem Cells and Differentiated Line


ABSTRACT: Briefly, the well characterized female hES cell line H9 was allowed to differentiate into a clonally purified mortal splanchnopleuric mesodermal somatic cell line EN13. The EN13 line was subsequently virally reprogrammed back to an induced pluripotent state (we term re-H9) using OCT4, SOX2, KLF4 retroviral vectors creating isogenic lines of hESC, hiPSC and mortal cells. Our results reveal several important differences between embryo-derived H9 and the induced re-H9 stem cells. We find a dysregulation of genes involved in imprinting and altered expression of X-chromosome localized genes in re-H9 cells. 10 Samples. 1 hESC line, 6 isogenic hiPSC lines, 1 non-isogenic hiPSC line, 1 isogenic mortal line, 1 non-isogenic mortal line

ORGANISM(S): Homo sapiens  

SUBMITTER: Jonathan H Teichroeb   Homayoun Vaziri 

PROVIDER: E-GEOD-31845 | ArrayExpress | 2011-09-02

SECONDARY ACCESSION(S): GSE31845PRJNA145101

REPOSITORIES: GEO, ArrayExpress

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