Transcriptomics

Dataset Information

2

Su(var)3-9-Q2598.D.mel 3rd Instar Larvae Nuclei


ABSTRACT: modENCODE_submission_3898 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of 125 chromosomal proteins across the Drosophila melanogaster genome. The proteins under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using genomic tiling arrays. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Strain: Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Developmental Stage: 3rd Instar Larvae; Genotype: wild type; NUMBER OF REPLICATES: 7; EXPERIMENTAL FACTORS: Strain Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Antibody Su(var)3-9-Q2598 (target is Su(var)3-9); Developmental Stage 3rd Instar Larvae

ORGANISM(S): Drosophila melanogaster  

SUBMITTER: Art Alekseyenko   Nicole Riddle  Aki Minoda  Cameron Kennedy  Yuri Schwartz  Peter Park  DCC modENCODE 

PROVIDER: E-GEOD-32859 | ArrayExpress | 2011-10-12

SECONDARY ACCESSION(S): GSE32859

REPOSITORIES: GEO, ArrayExpress

Dataset's files

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E-GEOD-32859.README.txt Txt
E-GEOD-32859.eSet.r Other
E-GEOD-32859.idf.txt Idf
E-GEOD-32859.raw.1.zip Raw
E-GEOD-32859.sdrf.txt Txt
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