Dataset Information


Expression analysis of Ralstonia solanacearum strain GMI1000 at 20°C and 28°C in rich medium (CPG) and in planta

ABSTRACT: Investigation of whole genome gene expression level changes in the bacterial wilt pathogen Ralstonia solanacearum, strain GMI1000 at 20°C and 28°C in culture and in planta. The tropical strain GMI1000 cannot wilt tomato plants at 20°C although it can cause full-blown disease at 28°C. A 16 array study using total RNA recovered from the following: 8 separate cultures of Ralstonia solanacearum strain GMI1000 grown in rich medium-CPG (4 grown at 20°C and 4 grown at 28°C) 8 separate in planta samples of Ralstonia solanacearum strain GMI1000 harvested from diseased tomato plants cv. BonnyBest (4 recovered from plants grown at 20°C and 4 from plants grown at 28°C) Each array (4-plex format) measures the expression level of 5061 genes from Ralstonia solanacearum strain GMI1000 with 2 to 6, 40-70 mer probes per gene, with two-fold technical redundancy. The arrays also contain probes for intergenic regions with no technical replicates.

ORGANISM(S): Ralstonia solanacearum GMI1000  

SUBMITTER: Caitilyn Allen   Lavanya Babujee  Jonathan M Jacobs  Fanhong Meng 

PROVIDER: E-GEOD-33657 | ArrayExpress | 2012-01-15



Similar Datasets

2012-01-15 | E-GEOD-33661 | ArrayExpress
2012-01-15 | E-GEOD-33662 | ArrayExpress
2011-06-01 | E-MTAB-542 | ArrayExpress
2011-09-10 | GSE18473 | GEO
2012-10-06 | E-GEOD-31807 | ArrayExpress
2009-12-10 | GSE19273 | GEO
2016-03-25 | E-MTAB-3402 | ArrayExpress
2011-09-09 | E-GEOD-18473 | ArrayExpress
2010-11-22 | E-GEOD-19178 | ArrayExpress
2009-12-09 | E-GEOD-19273 | ArrayExpress