Transcriptomics

Dataset Information

3

Transcript profiling of Arabidopsis msh1 mutants


ABSTRACT: The Arabidopsis msh1 mutant show various growth phenotype. We use microarray analysis to characterize gene expression pattern for two of the phenotypes - variegation and stunted growth. Wild type and msh1 RNAi variegated and stunted tissues were collected for RNA extration and hybridization on Affymetrix.

REANALYSED by: E-GEOD-35893

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Sally A Mackenzie   Ying-Zhi Xu 

PROVIDER: E-GEOD-35893 | ArrayExpress | 2012-07-11

SECONDARY ACCESSION(S): GSE35893PRJNA151951

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-35893.idf.txt Idf
E-GEOD-35893.processed.1.zip Processed
E-GEOD-35893.raw.1.zip Raw
E-GEOD-35893.sdrf.txt Txt
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Publications


Multicellular eukaryotes demonstrate nongenetic, heritable phenotypic versatility in their adaptation to environmental changes. This inclusive inheritance is composed of interacting epigenetic, maternal, and environmental factors. Yet-unidentified maternal effects can have a pronounced influence on plant phenotypic adaptation to changing environmental conditions. To explore the control of phenotypy in higher plants, we examined the effect of a single plant nuclear gene on the expression and tran  ...[more]

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