Transcriptomics

Dataset Information

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Small RNA sequencing in Arabidopsis plants


ABSTRACT: Identification of microRNA expressed in Arabidopsis plants grown at different ambient CO2 concentrations and different ambient temperatures Small RNA sequencing of Arabidopsis wild type ecotype Columbia (Col-0) rossette leaves at bolting stage grown at 430 ± 50ppm and 810 ± 50ppm CO2 concentrations and 22 ± 0.5oC and 28 ± 0.5oC temperatures

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Qiong A Liu   Patrick May  Will Liao  Michael Q Zhang 

PROVIDER: E-GEOD-36934 | ArrayExpress | 2013-12-22

SECONDARY ACCESSION(S): GSE36934SRP011993PRJNA157121

REPOSITORIES: GEO, ArrayExpress, ENA

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Publications

The effects of carbon dioxide and temperature on microRNA expression in Arabidopsis development.

May Patrick P   Liao Will W   Wu Yijin Y   Shuai Bin B   McCombie W Richard WR   Zhang Michael Q MQ   Liu Qiong A QA  

Nature communications 20130101


Elevated levels of CO2 and temperature can both affect plant growth and development, but the signalling pathways regulating these processes are still obscure. MicroRNAs function to silence gene expression, and environmental stresses can alter their expressions. Here we identify, using the small RNA-sequencing method, microRNAs that change significantly in expression by either doubling the atmospheric CO2 concentration or by increasing temperature 3-6 °C. Notably, nearly all CO2-influenced microR  ...[more]

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