Transcriptomics

Dataset Information

297

Individual-nucleotide resolution CLIP and high-throughput sequencing to map hnRNP L-RNA interactions in HeLa cells


ABSTRACT: Individual-nucleotide resolution UV-crosslinking and immunoprecipitation (iCLIP) combined with high-throughput sequencing was used to generate a transcriptome-wide binding map of hnRNP L. Supplementary file GSE37560_hnRNPL_crosslink_site.bed includes filtered crosslink sites of hnRNPL: combining data from all 3 experiments. 3 biological replicates of hnRNP L-specific and control (Flag) co-immunoprecipitated RNA after UV-crosslinking in HeLa cells

ORGANISM(S): Homo sapiens  

SUBMITTER: Albrecht Bindereif   Oliver Rossbach  Lee-Hsueh Hung 

PROVIDER: E-GEOD-37560 | ArrayExpress | 2014-02-13

SECONDARY ACCESSION(S): SRP012488GSE37560PRJNA162423

REPOSITORIES: GEO, ArrayExpress, ENA

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