Genomics

Dataset Information

4

MiRNA expression profile and small RNA transcriptome in the Squalius alburnoides complex


ABSTRACT: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

SUBMITTER: Angela Inácio  

PROVIDER: E-GEOD-38799 | ArrayExpress | 2013-01-02

SECONDARY ACCESSION(S): GSE38799PRJNA169349

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-38799.hyb.sdrf.txt Txt
E-GEOD-38799.idf.txt Idf
E-GEOD-38799.processed.1.zip Processed
E-GEOD-38799.processed.2.zip Processed
E-GEOD-38799.raw.1.zip Raw
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Publications

Global analysis of the small RNA transcriptome in different ploidies and genomic combinations of a vertebrate complex--the Squalius alburnoides.

Inácio Angela A   Pinho Joana J   Pereira Patrícia Matos PM   Comai Luca L   Coelho Maria Manuela MM  

PloS one 20120718 7


The Squalius alburnoides complex (Steindachner) is one of the most intricate hybrid polyploid systems known in vertebrates. In this complex, the constant switch of the genome composition in consecutive generations, very frequently involving a change on the ploidy level, promotes repetitive situations of potential genomic shock. Previously in this complex, it was showed that in response to the increase in genome dosage, triploids hybrids could regulate gene expression to a diploid state. In this  ...[more]

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