Transcriptomics

Dataset Information

8

Transcriptome sequencing of Prunus mume for different tissues.


ABSTRACT: We have sequenced a wild Prunus mume and constructed a reference sequence for this genome. In order to improve quality of gene models, RNA samples of five tissues (bud, leaf, root, stem, fruit) were extracted from the Prunus mume. To investigate tissue specific expression using the reference genome assembly and annotated genes, we extracted RNA samples of different tissues and conducted transcriptome sequencing and DEG analysis. Five RNA pools were created corresponding to different tissues of the Prunus mume.

ORGANISM(S): Prunus mume  

TISSUE(S): Bud, Fruit, Root, Leaf, Stem

SUBMITTER: Zhijun Zheng   Wenbin Chen  Qixiang Zhang  Lidan Sun 

PROVIDER: E-GEOD-40162 | ArrayExpress | 2012-12-27

SECONDARY ACCESSION(S): GSE40162SRP014885PRJNA172987

REPOSITORIES: GEO, ArrayExpress, ENA

Dataset's files

Source:
Action DRS
E-GEOD-40162.idf.txt Idf
E-GEOD-40162.processed.1.zip Processed
E-GEOD-40162.processed.2.zip Processed
E-GEOD-40162.sdrf.txt Txt
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