Transcriptomics

Dataset Information

297

Single-cell transcriptomics reveals widespread heterogeneity in gene regulation and RNA processing in stimulated immune cells


ABSTRACT: Here, we used single-cell RNA-Seq to discover extensive cell-to-cell variability – in transcript expression levels, cell state, circuit usage, and alternative splicing – between stimulated immune cells RNA seq libraries from 18 single cells, 3 populations of 10,000 cells, and 2 zero cells (negative controls) with SMARTer. Three additional single cell libraries with molecular barcodes (MB) using a modified SMARTer protocol.

ORGANISM(S): Mus musculus  

SUBMITTER: Alex K Shalek   Rahul Satija  Hongkun Park  Aviv Regev 

PROVIDER: E-GEOD-41265 | ArrayExpress | 2013-05-19

SECONDARY ACCESSION(S): GSE41265SRP015959PRJNA176414

REPOSITORIES: GEO, ArrayExpress, ENA

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