Transcriptomics

Dataset Information

4

Basal gene expression data of 21 cell lines (18 cancer and 3 non-tumorigenic)


ABSTRACT: We profiled basal gene expressed levels of 21 cell lines (18 cancer and 3 non-tumorigenic) using Affymetrix HG-U133_plus2 GeneChip microarrays. Goal of the experiment was to benchmark a number of algorithms for biomarker detection all of which utilize gene expression data. Cell lines were cultivated in appropriate media according to supplier recommendations. Goal was to acquire a basal gene expression profile of 21 common cell lines.

ORGANISM(S): Homo sapiens  

DISEASE(S): Adenocarcinoma,Colorectal Adenocarcinoma,Moderately Differentiated Adenocarcinoma,Non-tumorigenic,Carcinoma,Intraductal Adenocarcinoma,Fibrocystic Breast Disease,Dukes' Type B,Gleason Grade 4,Ductal Carcinoma,Malignant Melanoma,Inflammatory Skin Metastasis,Colorectal Carcinoma,Invasive Ductal Carcinoma,Spontaneously Immortilized Keratinocytes,Non-small Cell Carcinoma,Osteosarcoma,Renal Cell Adenocarcinoma,Aspartoacylase Deficiency,Possible Canavan Disease,Large Cell Carcinoma

SUBMITTER: Philip Groth   Oliver Politz 

PROVIDER: E-GEOD-41445 | ArrayExpress | 2012-10-10

SECONDARY ACCESSION(S): GSE41445PRJNA177029

REPOSITORIES: GEO, ArrayExpress

Dataset's files

Source:
Action DRS
E-GEOD-41445.README.txt Txt
E-GEOD-41445.idf.txt Idf
E-GEOD-41445.processed.1.zip Processed
E-GEOD-41445.raw.1.zip Raw
E-GEOD-41445.raw.2.zip Raw
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