Transcriptomics

Dataset Information

0

Expression analyses of red5-2 mutant cells


ABSTRACT: Investigation of whole genome gene expression level changes in red5-2, compared to the wild-type strain. The mutants analyzed in this study will be described in Sugiyama and Sugiyama. A mRNA profiling study using total RNA recovered from wild-type culture of fission yeast and red5-2 mutant cultures of fission yeast. Each chip measures the expression level of 4.997 genes from S.pombe with fourteen 60-mer probe pairs (PM/MM) per gene, with seven-fold technical redundancy.

ORGANISM(S): Schizosaccharomyces pombe  

SUBMITTER: Tomoyasu Sugiyama  

PROVIDER: E-GEOD-44714 | ArrayExpress | 2013-05-15

SECONDARY ACCESSION(S): GSE44714PRJNA191074

REPOSITORIES: GEO, ArrayExpress

altmetric image

Publications

Red5 and three nuclear pore components are essential for efficient suppression of specific mRNAs during vegetative growth of fission yeast.

Sugiyama Tomoyasu T   Wanatabe Nobuyoshi N   Kitahata Eri E   Tani Tokio T   Sugioka-Sugiyama Rie R  

Nucleic acids research 20130508 13


Zinc-finger domains are found in many nucleic acid-binding proteins in both prokaryotes and eukaryotes. Proteins carrying zinc-finger domains have important roles in various nuclear transactions, including transcription, mRNA processing and mRNA export; however, for many individual zinc-finger proteins in eukaryotes, the exact function of the protein is not fully understood. Here, we report that Red5 is involved in efficient suppression of specific mRNAs during vegetative growth of Schizosacchar  ...[more]

Similar Datasets

2013-12-01 | E-GEOD-49006 | ArrayExpress
2011-03-01 | E-GEOD-23083 | ArrayExpress
2013-04-11 | E-GEOD-45925 | ArrayExpress
2013-04-11 | E-GEOD-45920 | ArrayExpress
2013-04-11 | E-GEOD-45934 | ArrayExpress
2013-04-11 | E-GEOD-45922 | ArrayExpress
2014-07-31 | E-GEOD-59061 | ArrayExpress
2013-08-10 | E-GEOD-49713 | ArrayExpress
2013-05-01 | E-GEOD-44216 | ArrayExpress
2016-02-21 | E-GEOD-69071 | ArrayExpress