Transcriptomics

Dataset Information

299

Ribosome Profiling over a Zebrafish Developmental Timecourse


ABSTRACT: To experimentally-validate the non-coding status of annotated lncRNAs, we performed ribosome profiling over a developmental timecourse that matched our previously-published (Pauli et al. 2012) developmental transcriptome. We find that many previously-annotated lncRNAs appear to be translated, but in a pattern more akin to 5' leaders of coding genes. Ribosome profiling over 8 stages in early zebrafish development: 2-4 cell, 256 cell, 1K cell, Dome, Shield, Bud, 28hpf and 5dpf

ORGANISM(S): Danio rerio  

SUBMITTER: Andrea Pauli   Alexander Schier  Guo-Liang Chew  Eivind Valen 

PROVIDER: E-GEOD-46512 | ArrayExpress | 2013-05-23

SECONDARY ACCESSION(S): GSE46512SRP021915PRJNA200706

REPOSITORIES: GEO, ArrayExpress, ENA

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