H1.L3.Solexa
Ontology highlight
ABSTRACT: modENCODE_submission_5073 This submission comes from a modENCODE project of Gary Karpen. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We aim to determine the locations of the major histone modifications across the Drosophila melanogaster genome. The modifications under study are involved in basic chromosomal functions such as DNA replication, gene expression, gene silencing, and inheritance. We will perform Chromatin ImmunoPrecipitation (ChIP) using the Illumina NGS sequencing platform. We will initially assay localizations using chromatin from three cell lines and two embryonic stages, and will then extend the analysis of a subset of proteins to four additional animal tissues/stages. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf EXPERIMENT TYPE: CHIP-seq. BIOLOGICAL SOURCE: Strain: Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Developmental Stage: 3rd Instar Larvae; Genotype: wild type; EXPERIMENTAL FACTORS: Strain Oregon-R(official name : Oregon-R-modENCODE genotype : wild type ); Antibody H1 (target is H1); Developmental Stage 3rd Instar Larvae
ORGANISM(S): Drosophila melanogaster
SUBMITTER:
Nicole Riddle Gary Karpen DCC modENCODE Vincenzo Pirrotta Andrey Gortchakov Art Alekseyenko Michael Tolstorukov Greg Shanower Sarah Elgin Aki Minoda Mitzi Kuroda Cameron Kennedy Yuri Schwartz Peter Park Peter Kharchenko
PROVIDER: E-GEOD-48509 | ArrayExpress | 2013-07-03
SECONDARY ACCESSION(S): SRP026612GSE48509
REPOSITORIES: GEO, ArrayExpress, ENA
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