Transcriptomics

Dataset Information

0

The Fragile X Mental Retardation Protein (FMRP) controls diacylglycerol kinase in neurons


ABSTRACT: In this study, we sought to identify the mRNAs associated to FMRP protein in mouse cortical neuron using a cross linking immunoprecipitation and microarray (CLIP-microarray). The mRNAs crosslinked at 254 nm to FMRP in mouse cortical neurons cultured 8 days in vitro (8 DIV) were immunoprecipitated with H120 anti-FMRP (Santa Cruz) and reverse transcribed to labeled cDNAs with Ovation Pico WTA system V2 (Nugen) and hybridized on Mouse Gene 1.0ST (Affymetrix) We analyzed total RNA (Input) and FMRP-CLIPed RNA (Clip) from 10 primary cortical neuron mouse cultures (5 Wt Input, 5 FMR1-KO Input, 5 Wt Clip, 5 FMR1-KO Clip). Array data was processed by Affymetrix Exon Array Computational Tool. No technical replicates were performed.

ORGANISM(S): Mus musculus  

SUBMITTER: Ricardos Tabet   Nicolas Vitale  Dimitri Heintz  Laetitia Fouillen  Doulaye Dembele  Herve M Moine  Eric Flatter  Hervé Moine  Jean-Louis Mandel  Violaine Alunni 

PROVIDER: E-GEOD-51649 | ArrayExpress | 2016-06-01

SECONDARY ACCESSION(S): GSE51649PRJNA224197

REPOSITORIES: GEO, ArrayExpress

Similar Datasets

2016-07-04 | E-GEOD-71184 | ArrayExpress
2011-07-20 | E-GEOD-26745 | ArrayExpress
2013-03-15 | E-GEOD-45148 | ArrayExpress
| GSE101830 | GEO
2012-12-13 | E-GEOD-39682 | ArrayExpress
2011-07-20 | E-GEOD-26809 | ArrayExpress
2012-12-13 | E-GEOD-39504 | ArrayExpress
| GSE82068 | GEO
| GSE81911 | GEO
| GSE76490 | GEO