Transcriptomics

Dataset Information

98

Transcriptomic analysis of Plasmodium PBANKA, PBSLTRiP-KO, PB268-KO parasite infected and uninfected host cell


ABSTRACT: Liver stage of malaria parasite exports SLTRiP and PB268 to the cytosol of parasite infected host cell. To know the host genes perturbed by WT-PBANKA, SLTRiP-KO and PB268-KO parasite growth, we did transcriptomic sequencing of infected host cells. We did mRNA sequencing of four samples for comparative analysis of WT and PB-knockout parasites infected host cells at 22 hours of post sporozoites infection. mRNA profiles of Plasmodium PBANKA, PBSLTRiP-KO, PB268-KO parasite infected and uninfected HepG2 cells after 22hrs of sporozoites infections were generated by deep sequencing using Illumina GAIIx.

ORGANISM(S): Homo sapiens  

SUBMITTER: A Pandit  D K Jaijyan   A P Singh   Agam Prasad Singh    

PROVIDER: E-GEOD-53292 | ArrayExpress | 2016-12-28

SECONDARY ACCESSION(S): SRP034011GSE53292PRJNA231615

REPOSITORIES: GEO, ArrayExpress, ENA

altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets

| GSE53292 | GEO
2014-05-03 | E-GEOD-41873 | ArrayExpress
2014-06-04 | E-TABM-839 | ArrayExpress
2014-06-04 | E-TABM-1067 | ArrayExpress
2014-05-03 | E-MTAB-1145 | ArrayExpress
2012-05-11 | E-GEOD-34806 | ArrayExpress
2011-06-10 | E-GEOD-14967 | ArrayExpress
2008-01-07 | GSE8125 | GEO
2016-09-12 | E-GEOD-72049 | ArrayExpress
| GSE78931 | GEO