Transcriptomics

Dataset Information

297

Transcriptomic analysis of Plasmodium PBANKA, PBSLTRiP-KO, PB268-KO parasite infected and uninfected host cell


ABSTRACT: Liver stage of malaria parasite exports SLTRiP and PB268 to the cytosol of parasite infected host cell. To know the host genes perturbed by WT-PBANKA, SLTRiP-KO and PB268-KO parasite growth, we did transcriptomic sequencing of infected host cells. We did mRNA sequencing of four samples for comparative analysis of WT and PB-knockout parasites infected host cells at 22 hours of post sporozoites infection. mRNA profiles of Plasmodium PBANKA, PBSLTRiP-KO, PB268-KO parasite infected and uninfected HepG2 cells after 22hrs of sporozoites infections were generated by deep sequencing using Illumina GAIIx.

ORGANISM(S): Homo sapiens  

SUBMITTER: A Pandit   D K Jaijyan  A P Singh  Agam Prasad Singh 

PROVIDER: E-GEOD-53292 | ArrayExpress | 2016-07-03

SECONDARY ACCESSION(S): SRP034011GSE53292PRJNA231615

REPOSITORIES: GEO, ArrayExpress, ENA

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