Genomics

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Mapping and dynamics of regulatory DNA in A. thaliana accessions


ABSTRACT: We performed DNase-seq on 7-day-old seedlings from four A. thaliana accessions: Bur-0, Tsu-0, Bay-0, Est-1 using INTACT constructs (Deal and Henikoff, Developmental Cell, 2010) driven by the UBQ10 promoter. Chromatin accessibility profiling (Dnase I-seq) of 7-day-old seedlings of A. thaliana accessions: Bur-0, Tsu-0, Bay-0 & Est-1 grown in LD conditions (16hr light 22°C, 8hr dark 20°C).

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Morgan Diegel  Molly Weaver   John A Stamatoyannopoulos   Jun Neri   Peter J Sabo   Jennifer L Nemhauser   Agnieszka Dargiel   Alessandra M Sullivan   James Urton   Alex P Reynolds   Shane Neph   Andrej A Arsovski   Christine Queitsch   Kerry L Bubb   Richard Sandstrom   Robert Thurman   Audra K Johnson   Eric Haugen    

PROVIDER: E-GEOD-53323 | ArrayExpress | 2013-12-15

SECONDARY ACCESSION(S): SRP034155GSE53323PRJNA231718

REPOSITORIES: GEO, ArrayExpress, ENA

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