Transcriptomics

Dataset Information

3

MiRNA expression data from callus in standard fracture healing models and from fibrous tissues in nonunion models in rats on post-fracture day 14


ABSTRACT: Profiling of miRNA expressions comparing standard fracture healing models with nonunion models in rats 12w, male, Sprague–Dawley rats were used in this study. Animals were randomized to receive either a surgical treatment that has been shown to produce a nonunion or to a standard stabilized closed femoral shaft fracture that is known to successfully heal. The details of these procedures have been previously described. Briefly, to produce standard healing models, a 1.2-mm diameter K-wire was inserted retrograde into the right femoral intramedullary canal and a closed transverse femoral shaft fracture was produced using a three-point bending apparatus with a drop weight . To produce the nonunion, the fractured site was additionally exposed, and the periosteum was cauterized circumferentially for a distance of 2 mm on each side of the fracture . Five animals from each group were euthanized on post-fracture day 14 for microarray analysis.

ORGANISM(S): Rattus norvegicus  

SUBMITTER: Yoshihiro Dogaki   Takahiro Waki  Takahiro Niikura  Sang Y Lee 

PROVIDER: E-GEOD-55088 | ArrayExpress | 2015-09-03

SECONDARY ACCESSION(S): GSE55088PRJNA238504

REPOSITORIES: GEO, ArrayExpress

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Publications

Profiling microRNA expression in fracture nonunions: Potential role of microRNAs in nonunion formation studied in a rat model.

Waki T T   Lee S Y SY   Niikura T T   Iwakura T T   Dogaki Y Y   Okumachi E E   Kuroda R R   Kurosaka M M  

The bone & joint journal 20150801 8


MicroRNAs (miRNAs ) are small non-coding RNAs that regulate gene expression. We hypothesised that the functions of certain miRNAs and changes to their patterns of expression may be crucial in the pathogenesis of nonunion. Healing fractures and atrophic nonunions produced by periosteal cauterisation were created in the femora of 94 rats, with 1:1 group allocation. At post-fracture days three, seven, ten, 14, 21 and 28, miRNAs were extracted from the newly generated tissue at the fracture site. Mi  ...[more]

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