Transcriptomics

Dataset Information

36

Co-chaperone CCRP/DNAJC7-regulated gene regulation in the mouse liver


ABSTRACT: Co-chaperone protein CAR Cytoplasmic Retention Protein (CCRP) interacts with various nuclear receptors and determines their localization. However, there is limited information about in vivo role of CCRP especially in nuclear receptor-mediated gene regulation. We have generated CCRP global knockout (KO) mouse and have employed whole genome microarray analysis to reveal the role of CCRP in gene regulation in the mouse liver treated with phenobarbital (CAR activator) or non-treated. Male WT and KO mice were fasted for 24 h followed by the treatment with phenobarbital or vehicle PBS for 6h. Phenobarbital significantly induced or repressed 1302 and 2744 genes in WT and KO, respectively. Interestingly, cholesterol synthesizing genes were significantly up-regulated in KO even without treatment. Mice were fasted for 24 h followed by the intraperitoneally treatment with PBS or phenobarbital at dose of 100 mg/kg body weight for 6 h, or non-treatment.

ORGANISM(S): Mus musculus  

SUBMITTER: NIEHS Microarray Core  Marumi Ohno    

PROVIDER: E-GEOD-56557 | ArrayExpress | 2015-01-10

SECONDARY ACCESSION(S): GSE56557PRJNA243906

REPOSITORIES: GEO, ArrayExpress

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Publications

The roles of co-chaperone CCRP/DNAJC7 in Cyp2b10 gene activation and steatosis development in mouse livers.

Ohno Marumi M   Kanayama Tomohiko T   Moore Rick R   Ray Manas M   Negishi Masahiko M  

PloS one 20141226 12


Cytoplasmic constitutive active/androstane receptor (CAR) retention protein (CCRP and also known as DNAJC7) is a co-chaperone previously characterized to retain nuclear receptor CAR in the cytoplasm of HepG2 cells. Here we have produced CCRP knockout (KO) mice and demonstrated that CCRP regulates CAR at multiple steps in activation of the cytochrome (Cyp) 2b10 gene in liver: nuclear accumulation, RNA polymerase II recruitment and epigenetic modifications. Phenobarbital treatment greatly increase  ...[more]

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