Genomics

Dataset Information

297

Seq-UP07329_H4K16ac:DAM1687546_N2_Eemb


ABSTRACT: This submission comes from a modENCODE project of Jason Lieb. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: The focus of our analysis will be elements that specify nucleosome positioning and occupancy, control domains of gene expression, induce repression of the X chromosome, guide mitotic segregation and genome duplication, govern homolog pairing and recombination during meiosis, and organize chromosome positioning within the nucleus. Our 126 strategically selected targets include RNA polymerase II isoforms, dosage-compensation proteins, centromere components, homolog-pairing facilitators, recombination markers, and nuclear-envelope constituents. We will integrate information generated with existing knowledge on the biology of the targets and perform ChIP-seq analysis on mutant and RNAi extracts lacking selected target proteins.For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf EXPERIMENT TYPE: CHIP-seq. BIOLOGICAL SOURCE: Strain: N2; Developmental Stage: Early Embryo; Genotype: wild type; Sex: Hermaphrodite; EXPERIMENTAL FACTORS: Developmental Stage Early Embryo; temp (temperature) 20 degree celsius; Strain N2; Antibody MP07-329-H4K16ac (target is h4K16ac)

ORGANISM(S): Caenorhabditis elegans  

SUBMITTER: Andreas Rechtsteiner   Thea Egelhofer  Susan Strome 

PROVIDER: E-GEOD-56661 | ArrayExpress | 2014-04-10

SECONDARY ACCESSION(S): GSE56661SRP007859

REPOSITORIES: GEO, ArrayExpress, ENA

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