Transcriptomics

Dataset Information

5

Comparing Reference-Based RNA-Seq Mapping Methods for Non-Human Primate Data


ABSTRACT: We present a comparison of four reference-based mapping methods for mapping non-human primate data to a human reference sequence. We utilize TopHat2 and GSNAP for mapping to the human genome, and Bowtie2 and Stampy for mapping to the human genome and transcriptome for a total of six mapping approaches Comparison of reference-based mapping methods for 12 yellow baboons

ORGANISM(S): Papio cynocephalus  

SUBMITTER: Ashlee M Benjamin   Geoffrey S Ginsburg 

PROVIDER: E-GEOD-57485 | ArrayExpress | 2014-07-10

SECONDARY ACCESSION(S): SRP041821GSE57485PRJNA246538

REPOSITORIES: GEO, ArrayExpress, ENA

Dataset's files

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E-GEOD-57485.additional.1.zip Other
E-GEOD-57485.idf.txt Idf
E-GEOD-57485.sdrf.txt Txt
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