Genomics

Dataset Information

242

Methylation Changes in Arabidopsis Mature Green Seed Parts


ABSTRACT: Seeds are comprised of three major parts of distinct parental origin: the seed coat, embryo, and endosperm. The maternally-derived seed coat is important for nurturing and protecting the seeds during development. By contrast, the embryo and the endosperm are derived from a double fertilization event, where one sperm fertilizes the egg to form the diploid zygote and the other sperm fertilizes the central cell to form the triploid endosperm. Each seed part undergoes distinct developmental programs during seed development. What methylation changes occur in the different seed parts, if any, remains unknown. To uncover the possible role of DNA methylation in different parts of the seed, we characterized the methylome of two major parts of Arabidopsis mature green stage seeds, the seed coat and embryo, using Illumina sequencing. Illumina sequencing of bisulfite-converted genomic DNA from two parts of Arabidopsis mature green seeds: seed coat (SC) and embryo (EMB).

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Bob Goldberg   Robert B Goldberg  Jer Y Lin  Brandon H Le  Min Chen 

PROVIDER: E-GEOD-57755 | ArrayExpress | 2014-05-17

SECONDARY ACCESSION(S): SRP042049GSE57755PRJNA248004

REPOSITORIES: GEO, ArrayExpress, ENA

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