Transcriptomics

Dataset Information

94

Transcriptome analysis of 'Candidatus Liberibacter solanacearum' in its psyllid vector, Bactericera cockerelli


ABSTRACT: We seqeunced mRNA from the bacterial pathogen 'Candidatus Liberibacter solanacearum" during its association with the psyllid vector Bactericera cockerelli. Total RNA was purified from psyllids, insect and bacterial rRNAs were depleted. PolyA RNA was purified using Dynabeads. PolyA purified RNA and depleted RNA were sequenced.

ORGANISM(S): Candidatus Liberibacter solanacearum  

SUBMITTER: Freddy Ibanez  Julien G Levy   Cecilia Tamborindeguy    

PROVIDER: E-GEOD-57808 | ArrayExpress | 2014-09-06

SECONDARY ACCESSION(S): SRP042087GSE57808PRJNA248133

REPOSITORIES: GEO, ArrayExpress, ENA

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Publications

Transcriptome analysis of "Candidatus Liberibacter solanacearum" in its psyllid vector, Bactericera cockerelli.

Ibanez Freddy F   Levy Julien J   Tamborindeguy Cecilia C  

PloS one 20140703 7


"Candidatus Liberibacter solanacearum" (Lso) is an emergent pathogen of carrots in Europe and solanaceous plants in North and Central America and New Zealand. This bacterium is closely related to other pathogenic Candidatus Liberibacter spp., all vectored by psyllids. In order to understand the molecular interaction of this pathogen and its psyllid vector, Bactericera cockerelli, Illumina sequencing of psyllid harboring Lso was performed to determine if this approach could be used to assess the  ...[more]

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